Check for host availability before backup

Allow override MYSQL DB_PORT

CHANGELOG.md

@@ -1,3 +1,16 @@
+## 1.16 - 2019-06-16 - <dave at tiredofit dot ca>
+
+* Check to see if Database Exists before performing backup
+* Fix for MysQL/MariaDB custom ports - Credit to <spumer@github>
+
+## 1.15 - 2019-05-24 - <claudioaltamura @ github>
+
+* Added abaility to backup password protected Redis Hosts
+
+## 1.14 - 2019-04-20 - <dave at tiredofit dot ca>
+
+* Switch to using locally built mongodb-tools from tiredofit/mongo-builder due to Alpine removing precompiled packages from repositories
+
 ## 1.13 - 2019-03-09 - <dave at tiredofit dot ca>
 
 * Fixed Postgres backup without SPLIT_DB enabled (credit MelwinKfr@github)
@@ -60,3 +73,4 @@
 
 * Initial Release
 * Alpine:Edge
+

Dockerfile

@@ -1,6 +1,11 @@
+FROM tiredofit/mongo-builder as mongo-packages
+
 FROM tiredofit/alpine:edge
 LABEL maintainer="Dave Conroy (dave at tiredofit dot ca)"
 
+### Copy Mongo Packages
+COPY --from=mongo-packages / /usr/src/apk
+
 ### Set Environment Variables
    ENV ENABLE_CRON=FALSE \
        ENABLE_SMTP=FALSE
@@ -17,9 +22,9 @@ LABEL maintainer="Dave Conroy (dave at tiredofit dot ca)"
            xz-dev \
            && \
            \
-       apk add --virtual .db-backup-run-deps  \
+       apk add -t .db-backup-run-deps \
        	   bzip2 \
-           mongodb-tools \
+           influxdb \
            mariadb-client \
            libressl \
            pigz \
@@ -28,22 +33,27 @@ LABEL maintainer="Dave Conroy (dave at tiredofit dot ca)"
            redis \
            xz \
            && \
-        apk add \
+       apk add \
-            influxdb@testing \
+           pixz@testing \
-            pixz@testing \
            && \
-          \
+       \        
-          cd /usr/src && \
+       ## Locally Install Mongo Package
-          mkdir -p pbzip2 && \
+       cd /usr/src/apk && \
-          curl -ssL https://launchpad.net/pbzip2/1.1/1.1.13/+download/pbzip2-1.1.13.tar.gz | tar xvfz - --strip=1 -C /usr/src/pbzip2 && \
+       apk add -t .db-backup-mongo-deps --allow-untrusted \
-          cd pbzip2 && \
+           mongodb-tools*.apk \
-          make && \
+           && \
-          make install && \
+       \
-          \
+       cd /usr/src && \
-          # Cleanup
+       mkdir -p pbzip2 && \
-          rm -rf /usr/src/* && \
+       curl -ssL https://launchpad.net/pbzip2/1.1/1.1.13/+download/pbzip2-1.1.13.tar.gz | tar xvfz - --strip=1 -C /usr/src/pbzip2 && \
-          apk del .db-backup-build-deps && \
+       cd pbzip2 && \
-          rm -rf /tmp/* /var/cache/apk/*
+       make && \
+       make install && \
+       \
+### Cleanup
+       rm -rf /usr/src/* && \
+       apk del .db-backup-build-deps && \
+       rm -rf /tmp/* /var/cache/apk/*
 
 ### S6 Setup
     ADD install  /

README.md

@@ -1,4 +1,4 @@
-# tiredofit/db-backup
+# hub.docker.com/r/tiredofit/db-backup
 
 
 [![Build Status](https://img.shields.io/docker/build/tiredofit/db-backup.svg)](https://hub.docker.com/r/tiredofit/db-backup)
@@ -13,7 +13,7 @@ This will build a container for backing up multiple type of DB Servers
 
 Currently backs up CouchDB, InfluxDB, MySQL, MongoDB Postgres, Redis, Rethink servers.
 
-* dump to local filesystem 
+* dump to local filesystem
 * select database user and password
 * backup all databases
 * choose to have an MD5 sum after backup for verification
@@ -23,7 +23,7 @@ Currently backs up CouchDB, InfluxDB, MySQL, MongoDB Postgres, Redis, Rethink se
 * select how often to run a dump
 * select when to start the first dump, whether time of day or relative to container start time
 
-This Container uses Alpine:Edge as a base.
+* This Container uses a [customized Alpine Linux base](https://hub.docker.com/r/tiredofit/alpine) which includes [s6 overlay](https://github.com/just-containers/s6-overlay) enabled for PID 1 Init capabilities, [zabbix-agent](https://zabbix.org) based on `3.4` compiled for individual container monitoring, Cron also installed along with other tools (bash,curl, less, logrotate, nano, vim) for easier management. It also supports sending to external SMTP servers
 
 [Changelog](CHANGELOG.md)
 
@@ -40,7 +40,7 @@ This Container uses Alpine:Edge as a base.
 - [Quick Start](#quick-start)
 - [Configuration](#configuration)
     - [Data Volumes](#data-volumes)
-    - [Environment Variables](#environmentvariables)   
+    - [Environment Variables](#environmentvariables)
 - [Maintenance](#maintenance)
     - [Shell Access](#shell-access)
 
@@ -51,12 +51,12 @@ You must have a working DB server or container available for this to work proper
 
 # Installation
 
-Automated builds of the image are available on [Docker Hub](https://hub.docker.com/r/tiredofit/db-backup) and is the recommended 
+Automated builds of the image are available on [Docker Hub](https://hub.docker.com/r/tiredofit/db-backup) and is the recommended
 method of installation.
 
 
 ```bash
-docker pull tiredofit/db-backup
+docker pull tiredofit/db-backup:latest
 ```
 
 # Quick Start
@@ -77,7 +77,7 @@ The following directories are used for configuration and can be mapped for persi
 | Directory | Description |
 |-----------|-------------|
 | `/backup` | Backups |
-      
+
 
 ## Environment Variables
 
@@ -86,23 +86,22 @@ Along with the Environment Variables from the [Base image](https://hub.docker.co
 
 | Parameter | Description |
 |-----------|-------------|
-| `DB_TYPE` | Type of DB Server to backup `couch` `influx` `mysql` `pgsql` `mongo` `redis` `rethink` 
+| `COMPRESSION` | Use either Gzip `GZ`, Bzip2 `BZ`, XZip `XZ`, or none `NONE` - Default `GZ`
-| `DB_SERVER` | Server Hostname e.g. `mariadb`
+| `DB_TYPE` | Type of DB Server to backup `couch` `influx` `mysql` `pgsql` `mongo` `redis` `rethink`
+| `DB_HOST` | Server Hostname e.g. `mariadb`
 | `DB_NAME` | Schema Name e.g. `database`
 | `DB_USER` | username for the database - use `root` to backup all MySQL of them.
 | `DB_PASS` | (optional if DB doesn't require it) password for the database
+| `DB_PORT` | (optional) Set port to connect to DB_HOST. Defaults are provided
 | `DB_DUMP_FREQ` | How often to do a dump, in minutes. Defaults to 1440 minutes, or once per day.
 | `DB_DUMP_BEGIN` | What time to do the first dump. Defaults to immediate. Must be in one of two formats
 | | Absolute HHMM, e.g. `2330` or `0415`
 | | Relative +MM, i.e. how many minutes after starting the container, e.g. `+0` (immediate), `+10` (in 10 minutes), or `+90` in an hour and a half
-| `DB_DUMP_DEBUG` | If set to `true`, print copious shell script messages to the container log. Otherwise only basic messages are printed.
-| `DB_DUMP_TARGET` | Where to put the dump file, should be a directory. Supports three formats |
-| |  Local If the value of `DB_DUMP_TARGET` starts with a `/` character, will dump to a local path, which should be volume-mounted.
 | `DB_CLEANUP_TIME` | Value in minutes to delete old backups (only fired when dump freqency fires). 1440 would delete anything above 1 day old. You don't need to set this variable if you want to hold onto everything.
-| `COMPRESSION` | Use either Gzip `GZ`, Bzip2 `BZ`, XZip `XZ`, or none `NONE` - Default `GZ`
+| `DEBUG_MODE` | If set to `true`, print copious shell script messages to the container log. Otherwise only basic messages are printed.
 | `MD5` | Generate MD5 Sum in Directory, `TRUE` or `FALSE` - Default `TRUE`
-| `SPLIT_DB` | If using root as username and multiple DBs on system, set to TRUE to create Seperate DB Backups instead of all in one. - Default `FALSE` |
 | `PARALLEL_COMPRESSION` | Use multiple cores when compressing backups `TRUE` or `FALSE` - Default `TRUE` |
+| `SPLIT_DB` | If using root as username and multiple DBs on system, set to TRUE to create Seperate DB Backups instead of all in one. - Default `FALSE` |
 
 
 ## Maintenance
@@ -111,7 +110,7 @@ Manual Backups can be perforemd by entering the container and typing `backup-now
 
 #### Shell Access
 
-For debugging and maintenance purposes you may want access the containers shell. 
+For debugging and maintenance purposes you may want access the containers shell.
 
 ```bash
 docker exec -it (whatever your container name is e.g.) db-backup bash

install/etc/s6/services/10-db-backup/run

@@ -84,6 +84,7 @@ fi
             "redis" | "REDIS"   )
             DBTYPE=redis
             DBPORT=${DB_PORT:-6379}
+            [[ ( -n "${DB_PASS}" ) ]] && REDIS_PASS_STR=" -a ${DBPASS}"
             ;;
             "rethink" | "RETHINK"   )
             DBTYPE=rethink
@@ -103,14 +104,14 @@ function backup_couch() {
 }
 
 function backup_mysql() {
-    if [ "$SPLIT_DB" = "TRUE" ] || [ "$SPLIT_DB" = "true" ];  then   
+    if [ "$SPLIT_DB" = "TRUE" ] || [ "$SPLIT_DB" = "true" ];  then
-        DATABASES=`mysql -h $DBHOST -u$DBUSER -p$DBPASS --batch -e "SHOW DATABASES;" | grep -v Database|grep -v schema`
+        DATABASES=`mysql -h $DBHOST -P $DBPORT -u$DBUSER -p$DBPASS --batch -e "SHOW DATABASES;" | grep -v Database|grep -v schema`
-        
+
         for db in $DATABASES; do
                 if [[ "$db" != "information_schema" ]] && [[ "$db" != _* ]] ; then
                     echo "** [db-backup] Dumping database: $db"
                     TARGET=mysql_${db}_${DBHOST}_${now}.sql
-                    mysqldump --max-allowed-packet=512M -h $DBHOST -u$DBUSER ${MYSQL_PASS_STR} --databases $db > ${TMPDIR}/${TARGET}
+                    mysqldump --max-allowed-packet=512M -h $DBHOST -P $DBPORT -u$DBUSER ${MYSQL_PASS_STR} --databases $db > ${TMPDIR}/${TARGET}
                     generate_md5
                     compression
                     move_backup
@@ -137,7 +138,7 @@ function backup_mongo() {
     mongodump --out ${TMPDIR}/${TARGET} --host ${DBHOST} --port ${DBPORT} ${MONGO_USER_STR}${MONGO_PASS_STR}${MONGO_DB_STR} ${EXTRA_OPTS}
     cd ${TMPDIR}
     tar cf ${TARGET}.tar ${TARGET}/*
-    TARGET=${TARGET}.tar   
+    TARGET=${TARGET}.tar
     generate_md5
     compression
     move_backup
@@ -166,13 +167,13 @@ function backup_pgsql() {
 
 function backup_redis() {
     TARGET=redis_${db}_${DBHOST}_${now}.rdb
-    echo bgsave | redis-cli -h ${DBHOST} -p ${DBPORT} --rdb ${TMPDIR}/${TARGET}
+    echo bgsave | redis-cli -h ${DBHOST} -p ${DBPORT} ${REDIS_PASS_STR} --rdb ${TMPDIR}/${TARGET}
     echo "** [db-backup] Dumping Redis - Flushing Redis Cache First"
     sleep 10
     try=5
     while [ $try -gt 0 ] ; do
-        saved=$(echo 'info Persistence' | redis-cli -h ${DBHOST} -p ${DBPORT} | awk '/rdb_bgsave_in_progress:0/{print "saved"}')
+        saved=$(echo 'info Persistence' | redis-cli -h ${DBHOST} -p ${DBPORT} ${REDIS_PASS_STR} | awk '/rdb_bgsave_in_progress:0/{print "saved"}')
-        ok=$(echo 'info Persistence' | redis-cli -h ${DBHOST} -p ${DBPORT} | awk '/rdb_last_bgsave_status:ok/{print "ok"}')
+        ok=$(echo 'info Persistence' | redis-cli -h ${DBHOST} -p ${DBPORT} ${REDIS_PASS_STR} | awk '/rdb_last_bgsave_status:ok/{print "ok"}')
         if [[ "$saved" = "saved" ]] && [[ "$ok" = "ok" ]]; then
             echo "** [db-backup] Redis Backup Complete"
         fi
@@ -186,12 +187,84 @@ function backup_redis() {
 }
 
 function backup_rethink() {
-    TARGET=rethink_${db}_${DBHOST}_${now}.tar.gz  
+    TARGET=rethink_${db}_${DBHOST}_${now}.tar.gz
     echo "** [db-backup] Dumping rethink Database: $db"
     rethinkdb dump -f ${TMPDIR}/${TARGET} -c ${DBHOST}:${DBPORT} ${RETHINK_PASS_STR} ${RETHINK_DB_STR}
     move_backup
 }
 
+function check_availability() {
+### Set the Database Type
+   case "$DBTYPE" in
+        "couch" )
+            COUNTER=0
+            while ! (nc -z ${DBHOST} ${DBPORT}) ; do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] CouchDB Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+        "influx" )
+            COUNTER=0
+            while ! (nc -z ${DBHOST} ${DBPORT}) ; do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] InfluxDB Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+        "mongo" )
+            COUNTER=0
+            while ! (nc -z ${DBHOST} ${DBPORT}) ; do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] Mongo Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+        "mysql" )
+            COUNTER=0
+            while true; do
+                mysqlcmd='mysql -u'${DBUSER}' -P '${DBPORT}' -h '${DBHOST}' -p'${DBPASS}
+                out="`$mysqlcmd -e "SELECT COUNT(*) FROM information_schema.FILES;" 2>&1`"
+                echo "$out" | grep -E "COUNT|Enter" 2>&1 > /dev/null
+                if [ $? -eq 0 ]; then
+                    :
+                    break
+                fi
+                echo "** [db-backup] MySQL/MariaDB Server "$DBHOST" is not accessible, retrying.. ($COUNTER seconds so far)"
+                sleep 5
+                let COUNTER+=5
+            done
+        ;;
+        "pgsql" )
+            # Wait until mongo logs that it's ready (or timeout after 60s)
+            COUNTER=0
+            export PGPASSWORD=${DBPASS} 
+            until pg_isready --dbname=${DBNAME} --host=${DBHOST} --port=${DBPORT} --username=${DBUSER} -q
+            do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] Postgres Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+        "redis" )
+            COUNTER=0
+            while ! (nc -z ${DBHOST} ${DBPORT}) ; do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] Redis Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+        "rethink" )
+            COUNTER=0
+            while ! (nc -z ${DBHOST} ${DBPORT}) ; do
+                sleep 5
+                let COUNTER+=5
+                echo "** [db-backup] RethinkDB Host '"$DBHOST"' is not accessible, retrying.. ($COUNTER seconds so far)"
+            done
+        ;;
+    esac    
+}
+
 function compression() {
    case "$COMPRESSION" in
         "GZ" | "gz" | "gzip" | "GZIP")
@@ -212,7 +285,7 @@ function compression() {
 }
 
 function generate_md5() {
-if [ "$MD5" = "TRUE" ] || [ "$MD5" = "true" ] ;  then  
+if [ "$MD5" = "TRUE" ] || [ "$MD5" = "true" ] ;  then
     cd $TMPDIR
     md5sum ${TARGET} > ${TARGET}.md5
 fi
@@ -225,13 +298,13 @@ function move_backup() {
 }
 
 
-### Container Startup  
+### Container Startup
 echo '** [db-backup] Initialized at at '$(date)
 
 ### Wait for Next time to start backup
   current_time=$(date +"%s")
   today=$(date +"%Y%m%d")
-  
+
   if [[ $DB_DUMP_BEGIN =~ ^\+(.*)$ ]]; then
         waittime=$(( ${BASH_REMATCH[1]} * 60 ))
   else
@@ -257,34 +330,41 @@ echo '** [db-backup] Initialized at at '$(date)
 ### Take a Dump
        case "$DBTYPE" in
         "couch" )
+        check_availability
         backup_couch
         ;;
         "influx" )
+        check_availability
         backup_influx
         ;;
         "mysql" )
+        check_availability
         backup_mysql
         ;;
         "mongo" )
+        check_availability
         backup_mongo
         ;;
         "pgsql" )
+        check_availability
         backup_pgsql
         ;;
         "redis" )
+        check_availability
         backup_redis
         ;;
         "rethink" )
+        check_availability
         backup_rethink
         ;;
         esac
 
-### Zabbix 
+### Zabbix
     if [ "$ENABLE_ZABBIX" = "TRUE" ] || [ "$ENABLE_ZABBIX" = "true" ];  then
         zabbix_sender -c /etc/zabbix/zabbix_agentd.conf -k dbbackup.size -o `stat -c%s ${DB_DUMP_TARGET}/${TARGET}`
         zabbix_sender -c /etc/zabbix/zabbix_agentd.conf -k dbbackup.datetime -o `date -r  ${DB_DUMP_TARGET}/${TARGET} +'%s'`
     fi
-    
+
 ### Automatic Cleanup
     if [[ -n "$DB_CLEANUP_TIME" ]]; then
           find $DB_DUMP_TARGET/  -mmin +$DB_CLEANUP_TIME -iname "$DBTYPE_$DBNAME_*.*" -exec rm {} \;